C_iC^iZZ/d-graded factorizations can be either homologically or cohomologically graded. Subscripts refer to homological indices, and superscripts refer to cohomological indices.
In this package homological indices are used by default. We always have the equation $C^i = C_{-i}$.
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Indices that are outside of the period are taken modulo the period.
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The source of this document is in MatrixFactorizations/MatrixFactorizationsDOC.m2:820:0.