- checkPD -- returns positive definite matrices from a list of symmetric matrices
- checkPD(...,ZeroTolerance=>...) -- optional input to set the largest absolute value that should be treated as zero
- checkPD(List) -- returns positive definite matrices from a list of symmetric matrices
- checkPD(Matrix) -- returns positive definite matrices from a list of symmetric matrices
- checkPSD -- returns positive semidefinite matrices from a list of symmetric matrices
- checkPSD(...,ZeroTolerance=>...) -- optional input to set the largest absolute value that should be treated as zero
- checkPSD(List) -- returns positive semidefinite matrices from a list of symmetric matrices
- checkPSD(Matrix) -- returns positive semidefinite matrices from a list of symmetric matrices
- ConcentrationMatrix -- optional input to output MLE for concentration matrix instead of MLE for covariance matrix
- CovarianceMatrix -- optional input to output covariance matrix
- GraphicalModelsMLE -- a package for MLE of parameters for Gaussian graphical models
- jacobianMatrixOfRationalFunction -- Jacobian matrix of a rational function
- jacobianMatrixOfRationalFunction(RingElement) -- Jacobian matrix of a rational function
- MLdegree -- ML-degree of a graphical model
- MLdegree(Ring) -- ML-degree of a graphical model
- OptionsEigenSolver -- optional input to use options of "zeroDimSolve" in "EigenSolver"
- OptionsNAG4M2 -- optional parameter to set the parameters of solveSystem in NumericalAlgebraicGeometry
- RealPrecision -- optional input to choose the number of decimals used to round to QQ when inputing data in RR
- sampleCovarianceMatrix -- sample covariance matrix of observation vectors
- sampleCovarianceMatrix(List) -- sample covariance matrix of observation vectors
- sampleCovarianceMatrix(Matrix) -- sample covariance matrix of observation vectors
- SampleData -- optional input to allow to input the sample covariance matrix instead of sample data
- Saturate -- optional input whether to saturate
- SaturateOptions -- optional input to use options "saturate"
- scoreEquations -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(...,CovarianceMatrix=>...) -- output covariance matrix
- scoreEquations(...,RealPrecision=>...) -- the number of bits of precision to use in the computation
- scoreEquations(...,SampleData=>...) -- input sample covariance matrix instead of sample data
- scoreEquations(...,Saturate=>...) -- whether to saturate
- scoreEquations(...,SaturateOptions=>...) -- use options from "saturate"
- scoreEquations(Bigraph,Digraph,Graph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Digraph,Graph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Digraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Digraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Graph,Digraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Graph,Digraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Graph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Graph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Bigraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Bigraph,Graph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Bigraph,Graph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Bigraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Bigraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Graph,Bigraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Graph,Bigraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Graph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Graph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Digraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Bigraph,Digraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Bigraph,Digraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Bigraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Bigraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Digraph,Bigraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Digraph,Bigraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Digraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Digraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Graph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Bigraph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Bigraph,Digraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Bigraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Bigraph,Graph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Digraph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Digraph,Bigraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Digraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Digraph,Graph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Graph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Graph,Bigraph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Graph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Graph,Digraph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,MixedGraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(List,Ring) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Bigraph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Bigraph,Digraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Bigraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Bigraph,Graph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Digraph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Digraph,Bigraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Digraph,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Digraph,Graph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Graph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Graph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Graph,Bigraph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Graph,Digraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Graph,Digraph,Bigraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,MixedGraph) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Matrix,Ring) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(MixedGraph,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(MixedGraph,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Ring,List) -- score equations of the log-likelihood function of a Gaussian graphical model
- scoreEquations(Ring,Matrix) -- score equations of the log-likelihood function of a Gaussian graphical model
- Solver -- optional input to choose numerical solver
- solverMLE -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(...,ConcentrationMatrix=>...) -- output MLE for concentration matrix instead of MLE for covariance matrix
- solverMLE(...,OptionsEigenSolver=>...) -- use options of "zeroDimSolve" in "EigenSolver"
- solverMLE(...,OptionsNAG4M2=>...) -- use options of "solveSystem" in "NumericalAlgebraicGeometry"
- solverMLE(...,RealPrecision=>...) -- the number of bits of precision to use in the computation
- solverMLE(...,SampleData=>...) -- input sample covariance matrix instead of sample data
- solverMLE(...,Saturate=>...) -- whether to saturate
- solverMLE(...,SaturateOptions=>...) -- use options from "saturate"
- solverMLE(...,Solver=>...) -- choose numerical solver
- solverMLE(...,ZeroTolerance=>...) -- optional input to set the largest absolute value that should be treated as zero
- solverMLE(Bigraph,Digraph,Graph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Digraph,Graph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Digraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Digraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Graph,Digraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Graph,Digraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Graph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Graph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Bigraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Bigraph,Graph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Bigraph,Graph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Bigraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Bigraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Graph,Bigraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Graph,Bigraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Graph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Graph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Digraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Bigraph,Digraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Bigraph,Digraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Bigraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Bigraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Digraph,Bigraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Digraph,Bigraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Digraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Digraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Graph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Bigraph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Bigraph,Digraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Bigraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Bigraph,Graph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Digraph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Digraph,Bigraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Digraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Digraph,Graph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Graph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Graph,Bigraph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Graph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Graph,Digraph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,MixedGraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(List,Ring) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Bigraph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Bigraph,Digraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Bigraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Bigraph,Graph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Digraph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Digraph,Bigraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Digraph,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Digraph,Graph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Graph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Graph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Graph,Bigraph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Graph,Digraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Graph,Digraph,Bigraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,MixedGraph) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Matrix,Ring) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(MixedGraph,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(MixedGraph,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Ring,List) -- Maximum likelihood estimate of a loopless mixed graph
- solverMLE(Ring,Matrix) -- Maximum likelihood estimate of a loopless mixed graph
- ZeroTolerance -- optional input to set the largest absolute value that should be treated as zero